uid=MCM,o=EDI,dc=edirepository,dc=org all public read strmalgi Stream Algal Abundances Diane McKnight diane.mcknight@colorado.edu https://orcid.org/0000-0002-4171-1533 McMurdo Dry Valleys LTER http://mcmlter.org/ 2015-01-21 English
As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the abundance and species distribution of algal mats in glacial meltwater streams of the region. This table contains data showing the percent of total biomass (abundance) represented by algal type (brown, red, orange or green), phylum, species and morphotype for multiple streams, dates, and replications.
abundance algae morphotype phylum stream Station Keywords population dynamics LTER Core Areas
Data Policies This data package is released under the Creative Commons Attribution 4.0 International License (CC BY 4.0; http://creativecommons.org/licenses/by/4.0/), which allows consumers (hereinafter referred to as “Data Users”) to freely reuse, redistribute, transform, or build on this work (even commercially) so long as appropriate credit is provided. Accordingly, Data Users are required to properly cite this data package in any publications or in the metadata of any derived products that result from its use (in whole or in part). A recommended citation is provided on the summary metadata page associated with this data package in the McMurdo Dry Valleys LTER Data Catalog (https://mcmlter.org/data), and a generic citation may be found on the summary metadata page in the repository where this data package was obtained. When these data contribute significantly to the contents of a publication, Data Users must also acknowledge that data were provided by the NSF-supported McMurdo Dry Valleys Long Term Ecological Research program (OPP-1637708). This data package has been released in the spirit of open scientific collaboration. Hence, Data Users are strongly encouraged to consider consultation, collaboration, and/or co-authorship (as appropriate) with the data package creator(s). Data Users should be aware these data may be actively used by others for ongoing research; thus, coordination may be necessary to prevent duplicate publication. Data Users should also recognize that misinterpretation of data may occur if they are used outside the context of the original study. Hence, Data Users are urged to contact the data package creator(s) if they have any questions regarding methodology or results. While substantial efforts are made to ensure the accuracy of this data package (with all its components), complete accuracy cannot be guaranteed. Periodic updates to this data package may occur, and it is the responsibility of Data Users to check for new versions. This data package is made available “as is” and comes with no warranty of accuracy or fitness for use. The creator(s) of this data package and the repository where these data were obtained shall not be liable for any damages resulting from misinterpretation, use, or misuse of these data. Finally, as a professional courtesy, we kindly request Data Users notify the primary contact referenced in the metadata when these data are used in the production of any derivative work or publication. Notification should include an explanation of how the data were used, along with a digital copy of the derived product(s). Thank you.
https://mcm.lternet.edu/content/stream-algal-abundances Transect by Andersen Creek near Gage Moss Site M-01, H01Simm-G, H1 Transect 1 Points T011 and T012 mark the start and end of the transect. Start : IDs: 1ANDRSNT011 Ellipsoid: 23.73 ORTHOMETRIC HT (m) 78.97 End: ID: 1ANDRSNT012 Ellipsoid: 22.64 ORTHOMETRIC HT (m) 77.88 File provenance: strm-clg.txt 162.906311035156 162.907409667969 -77.622917175293 -77.622985839844 78 78 meter Transect by Canada Stream near Gage Moss Site M-03, F04Cana-G Transect 3 Points T031 and T032 mark the start and end of the transect. Start : IDs: 3CNGAGET031 Ellipsoid: 0.22 ORTHOMETRIC HT (m) 55.46 End: ID: 3CNGAGET032 Ellipsoid: -2.37 ORTHOMETRIC HT (m) 52.85 File provenance: strm-clg.txt 163.050796508789 163.052688598633 -77.613243103027 -77.613395690918 54 54 meter Transect by Canada Stream at Delta Moss Site M-04, F04Cana-D Transect 4 Points T041 and T042 mark the start and end of the transect. Start : IDs: 4CNDELTAT041 Ellipsoid: -30.52 ORTHOMETRIC HT (m) 24.72 End: ID: 4CNDELTAT042 Ellipsoid: -31.83 ORTHOMETRIC HT (m) 23.39 File provenance: strm-clg.txt 163.069854736328 163.070114135742 -77.614593505859 -77.614814758301 24 24 meter Transect by Von Guerard Stream at Upper Site Moss Site M-05 Transect 5 Points T051 and T052 mark the start and end of the transect. Start : IDs: 5VGUPPERT051 Ellipsoid: 114.08 ORTHOMETRIC HT (m) 169.27 End: ID: 5VGUPPERT052 Ellipsoid: 120.24 ORTHOMETRIC HT (m) 175.41 File provenance: strm-clg.txt 163.305282592773 163.307327270508 -77.634208679199 -77.634559631348 172 172 meter Transect by Von Guerard Stream at Lower Site Moss Site M-06 Transect 6 Points T061 and T062 mark the start and end of the transect. Start : IDs: 6VGLOWERT061 Ellipsoid: 33.99 ORTHOMETRIC HT (m) 89.19 End: ID: 6VGLOWERT062 Ellipsoid: 33.74 ORTHOMETRIC HT (m) 88.92 File provenance: strm-clg.txt 163.287460327148 163.288482666016 -77.619300842285 -77.619659423828 89 89 meter Transect by Delta Stream at Upper Site Moss Site M-07, F08Delt-U Transect 7 Points T071 and T072 mark the start and end of the transect. Start : IDs: 7DLTUPPERT071 Ellipsoid: 201.5 ORTHOMETRIC HT (m) 256.72 End: ID: 7DLTPPERT072 Ellipsoid: 201.53 ORTHOMETRIC HT (m) 256.73 File provenance: strm-clg.txt 163.097671508789 163.099685668945 -77.652854919434 -77.653213500977 256 256 meter Transect by Delta Stream at gage Moss Site M-08, F08Delt-G Transect 8 Points T081 and T082 mark the start and end of the transect. Start : IDs: 8DLTGAGET081, Ellipsoid: -23.45 ORTHOMETRIC HT (m) 31.78 End: ID: 8DLTGAGET082 Ellipsoid: -19.93 ORTHOMETRIC HT (m) 35.28 File provenance: strm-clg.txt 163.108413696289 163.110809326172 -77.625495910645 -77.625877380371 33 33 meter Transect by green Creek above gage Moss Site M-09, F09Green-G Transect 9 Points T091 and T092 mark the start and end of the transect. Start : IDs: 9GREENT091, Ellipsoid: -22.66 ORTHOMETRIC HT (m) 32.58 End: ID: 9GREENT092 Ellipsoid: -26.5 ORTHOMETRIC HT (m) 28.72 File provenance: strm-clg.txt 163.058395385742 163.059310913086 -77.623992919922 -77.624420166016 30 30 meter Transect by Bowles Creek near gage Moss Site M-10, F10Bowl-G Transect 10 Points T101 and T102 mark the start and end of the transect. Start : IDs: 10BOWLEST101, Ellipsoid: -25.54 ORTHOMETRIC HT (m) 29.7 End: ID: 10BOWLEST102 Ellipsoid: -24.01 ORTHOMETRIC HT (m) 31.24 File provenance: strm-clg.txt 163.057083129883 163.057601928711 -77.623100280762 -77.623336791992 30 30 meter Transect by Huey Creek near gage Moss Site M-11, F11Huey-G Transect 11 Points T111 and T112 mark the start and end of the transect. Start : IDs: 10BOWLEST111, Ellipsoid: -14.09 ORTHOMETRIC HT (m) 41.15 End: ID: 10BOWLEST112 Ellipsoid: -12.91 ORTHOMETRIC HT (m) 42.31 File provenance: strm-clg.txt 163.121688842773 163.122741699219 -77.601676940918 -77.602165222168 42 42 meter Transect by Von Guerard Stream at gage Moss Site M-12, F12Vong-G Transect 12 Points T121 and T122 mark the start and end of the transect. Start : IDs: 12VGGAGET121, Ellipsoid: -30.67 ORTHOMETRIC HT (m) 24.53 End: ID: 12VGGAGET122 Ellipsoid: -31.35 ORTHOMETRIC HT (m) 23.87 File provenance: strm-clg.txt 163.253005981445 163.255294799805 -77.609222412109 -77.609474182129 24 24 meter Moss Site 13 Transect 13 Points T131 and T132 mark the start and end of the transect. Start : IDs: 13PRISCUT131, Ellipsoid: 16.79 ORTHOMETRIC HT (m) 71.96 End: ID: 13PRISCUT132 Ellipsoid: 21.49 ORTHOMETRIC HT (m) 76.64 File provenance: strm-clg.txt 162.537292480469 162.539794921875 -77.696228027344 -77.696861267090 76 76 meter Transect by Lawson creek near gage Moss Site M-14, B14Laws-G Transect 14 Points T141 and T142 mark the start and end of the transect. Start : IDs: 14LAWSONT141, Ellipsoid: 24.08 ORTHOMETRIC HT (m) 79.13 End: ID: 14LAWSONT144 Ellipsoid: 30.05 ORTHOMETRIC HT (m) 85.08 File provenance: strm-clg.txt 162.266586303711 162.268783569336 -77.720359802246 -77.720619201660 83 83 meter Transect by Boehner Stream at lower site. B15Bohn-L Transect 15 Points T151 and T152 mark the start and end of the transect. Start : IDs: 15BOHNERT151 Ellipsoid: 74.57 ORTHOMETRIC HT (m) 129.74 End: ID: 15BOHNERT152 Ellipsoid: 70.17 ORTHOMETRIC HT (m) 125.32 File provenance: strm-clg.txt 162.559936523438 162.563919067383 -77.696968078613 -77.697700500488 185 185 meter Transect by Wharton Creek at Delta Moss Site M-16 Transect 16 Points T161 and T162 mark the start and end of the transect. Start : IDs: 16WHARTONT161 Ellipsoid: 24.1 ORTHOMETRIC HT (m) 79.31 End: ID: 16WHARTONT162 Ellipsoid: 23.61 ORTHOMETRIC HT (m) 78.82 File provenance: strm-clg.txt 162.745101928711 162.746231079102 -77.644943237305 -77.645057678223 79 79 meter 1994-01-01 1994-12-31 Data from this table was initially included in the raw data files specified under the variable for 'file name'. These are Microsoft Excel version 6.0 files. Once submitted to INSTAAR, the data manager combined all of the stream biology files that included variables for "abundance", and removed any variables that had no direct influence on the total biomass (abundance) of a given algal type, phylum, species, and morphotype. The resulting table is represented in the "strmalgi.dat" (ascii comma delimited format) and "strmalgi.txt" (MS-DOS text - table layout) files used on the web page. In November, 1999, the data manager added a field for stream transect ID code. This assisted in preparing the data for use in Oracle and ArcInfo. In July, 2000, the dataset code field was added in order to simplify generating links between different data and metadata fields. McMurdo Dry Valleys LTER http://mcmlter.org/ McMurdo Dry Valleys LTER http://mcmlter.org/ McMurdo Dry Valleys LTER
Within each transect, algal mats were visually identified as either orange, red, black, or green. Not all types of algal mats were found within every transect. A maximum of five algal samples of each color were collected from each transect using a #13 cork borer (diameter = 17 mm, area = 227 mm2). Algal samples were preserved in 10% formalin for laboratory identifications. In all, 141 algal samples were collected from 12 streams. Preserved algal samples were examined in the laboratory to determine species composition and relative abundance using a Nikon Diaphot phase contrast microscope. Samples were well mixed to attain an even (random) sampling of mat (some small "clumps" of algae were still present, but these did not affect the objectives of the study), and then subsamples of 2 ml were withdrawn. Each subsample was placed in a 2-ml settling chamber with a 26 mm diameter and examined at x400 magnification. To get a representative count of relative species abundance, seven random fields (a total of 0.44 mm2) needed to be examined per subsample. Within each field, algae were identified to genus and species where possible (excluding diatoms, which were counted but not identified.) Percent cover was determined in each field by measuring the length and width of all specimens using an ocular micrometer. Cell "depth" was also measured in order to estimate biovolume. All seven fields were then tallied, and the percentage of the total algal biomass was determined for each taxa. Taxonomic identifications were primarily based on the classical Antarctic literature.
strmalgi strmalgi.csv 634287 1 0 \r\n column , " https://mcm.lternet.edu/sites/default/files/data/strmalgi.csv Strmtrnsid Strmtrnsid Code representing stream transect string Code representing stream transect Location Location Stream location / name of transect in which measurements were made string Stream location / name of transect in which measurements were made DATE_TIME Date Date of sample date mm/dd/yyyy Algae Type Algae Type Type of algae species is associated with (red, black, green or orange) string Type of algae species is associated with (red, black, green or orange) Replication Replicate# Replication number of sample string Replication number of sample Transect Transect Transect ID for sample string Transect ID for sample Phylum Phylum Algal phylum string Algal phylum Species Species Algal species string Algal species Morphotype Morphotype Morphotype of species string Morphotype of species Abundance Abundance Percent of total biomass represented by algae type, phylum, species, morphotype dimensionless 0.1 real 0 100 Required entry None given File name File name Original file name in which this information was submitted string Original file name in which this information was submitted